## Loading required package: dplyr
##
## Attaching package: 'dplyr'
## The following objects are masked from 'package:stats':
##
## filter, lag
## The following objects are masked from 'package:base':
##
## intersect, setdiff, setequal, union
## Loading required package: grid
## Loading required package: ggplot2
## V1
## 1 TNC
## 2 ATXN3
## 3 FAM76B
## 4 CAP2
## 5 PNPLA7
## 6 PPAN
## 7 DACH1
## 8 CPLX1
## 9 SKA2
## 10 BICD2
## 11 HOXC6
## V1
## 1 C19orf60
## 2 OSBPL5
## 3 CD44
## 4 ZFYVE16
## 5 TLE2
## 6 ST6GALNAC1
## 7 LIMS2
## 8 CALD1
## 9 PNKD
## 10 SHC2
## 11 RIN2
## 12 MYO10
## 13 C7orf50
## 14 AK3
## 15 RABGEF1
## 16 TSPAN7
## 17 FMNL3
## 18 ING2
## 19 PCCA
## 20 SH3BGR
## 21 BTN3A2
## V1
## 1 CD44
## 2 RC3H2
## 3 CEACAM1
## 4 NRCAM
## 5 CDADC1
## 6 GSPT1
## 7 CAV1
## 8 DNMBP
## 9 LIPA
## 10 NCOA7
## 11 KTN1
## 12 PDGFRA
## 13 BCAR3
## 14 RGS3
## 15 TARS2
## 16 ZNF385B
## 17 OBSCN
## 18 NAGS
## 19 BSCL2
## 20 PCMTD1
## 21 AP1S2
## 22 EXD3
## 23 ZNF44
## 24 WWP2
## 25 CTNND1
## 26 SCAMP5
## V1
## 1 KIF22
## 2 NXT2
## 3 NT5E
## 4 GBAS
## 5 PANK1
## 6 CXADR
## 7 MFAP4
## 8 NUDT6
## 9 FGGY
## 10 AQP1
## V1
## 1 SPAG9
## 2 LSR
## 3 ITM2C
## 4 CXADR
## 5 CPLX1
## 6 TNFRSF10C
## V1
## 1 CASP10
## 2 SDCCAG8
## 3 ATXN3
## 4 CECR1
## 5 DYRK1B
## 6 LSR
## 7 MEST
## 8 GAB1
## 9 CNOT2
## 10 MKLN1
## 11 SHROOM2
## 12 NTRK2
## 13 DST
## 14 IL17RE
## 15 PPFIBP2
## 16 WWOX
## 17 CTNND1
## V1
## 1 VAMP1
## V1
## 1 CFH
## 2 C1orf198
## 3 FAM174B
## V1
## 1 C19orf60
## 2 MLXIPL
## 3 PLEKHH1
## 4 ATP2B4
## 5 SLC9A3R2
## 6 FGFR2
## 7 RASSF1
## 8 ATP2B1
## 9 BAZ2A
## 10 SMARCA2
## 11 EPS15
## 12 IPO11
## 13 MMP2
## 14 CECR1
## 15 MFNG
## 16 PATZ1
## 17 ASB9
## 18 FLT1
## 19 TAF1C
## 20 ILVBL
## 21 TIMM50
## 22 ADAP1
## 23 CAV1
## 24 DOCK8
## 25 DNMBP
## 26 LIPA
## 27 SHOC2
## 28 KLHL2
## 29 ST3GAL4
## 30 MVK
## 31 SCNN1A
## 32 BTN3A3
## 33 DOCK7
## 34 MXI1
## 35 ARAP3
## 36 ACOT9
## 37 IQSEC2
## 38 PSD4
## 39 EML2
## 40 TRPM4
## 41 EPS8L1
## 42 DIAPH1
## 43 DMGDH
## 44 PDGFRA
## 45 BIVM
## 46 ITM2C
## 47 CIB2
## 48 BIN1
## 49 FPGS
## 50 BCAR3
## 51 NCOA4
## 52 RNF185
## 53 SSBP2
## 54 DCDC2
## 55 ZNF185
## 56 TM7SF2
## 57 SCOC
## 58 ABI3BP
## 59 CXADR
## 60 RABGEF1
## 61 RMND1
## 62 AIFM1
## 63 SLC35B2
## 64 KALRN
## 65 MUM1
## 66 TBC1D24
## 67 STK36
## 68 HDAC11
## 69 MYO5B
## 70 TMCC1
## 71 GOLGA8A
## 72 EFCAB4A
## 73 GRAMD1C
## 74 LIMK2
## 75 SPNS3
## 76 AFMID
## 77 RBM33
## 78 FAM174B
## 79 MITF
## 80 ZNF559
## 81 TMEM201
## 82 ZNF44
## 83 WWP2
## 84 SCAMP5
## 85 PPME1
## 86 CUX1
## Normal_Isoform_Cancer_Isoform
## 1 uc003gbj_uc003gbi
## 2 uc004aso_uc004asp
## 3 uc003ncb_uc011djb
## Normal_Isoform_Cancer_Isoform
## 1 uc002vhm_uc002vhq
## Normal_Isoform_Cancer_Isoform
## 1 uc002otv_uc002otw
## 2 uc001mvx_uc001mvw
## 3 uc002unj_uc002unn
## Normal_Isoform_Cancer_Isoform
## 1 uc003iew_uc003iex
## 2 uc003tbv_uc010kwf
## 3 uc003pko_uc010kbr
## 4 uc003tre_uc003trf
## 5 uc002yki_uc002ykj
## 6 uc001kgn_uc001kgo
## 7 uc001qyu_uc001qyt
## Normal_Isoform_Cancer_Isoform
## 1 uc003gbj_uc003gbi
## 2 uc002yki_uc002ykj
## Normal_Isoform_Cancer_Isoform
## 1 uc002uxj_uc010ftb
## 2 uc002nym_uc002nyn
## 3 uc003vqg_uc003vqc
## [1] Normal_Isoform_Cancer_Isoform
## <0 rows> (or 0-length row.names)
## [1] Normal_Isoform_Cancer_Isoform
## <0 rows> (or 0-length row.names)
## Normal_Isoform_Cancer_Isoform
## 1 uc001kza_uc001kyy
## 2 uc003akb_uc003ake
## 3 uc004evg_uc004evi
## 4 uc002bdb_uc002bdc
## 5 uc002cok_uc002coi
## 6 uc001dpx_uc001dpy
## 7 uc002yki_uc002ykj
## 8 uc004bsg_uc004bsi
## 9 uc003aks_uc003akr
## 10 uc003eas_uc003eaq
## [1] "uc003gbj" "uc004aso" "uc003ncb" "uc001sev"
## [1] "uc002tpa" "uc001voo" "uc001lxk" "uc002njv" "uc002vhm" "uc002jsh"
## [7] "uc003kgq" "uc002loq" "uc003jft" "uc003ziq" "uc004deg" "uc002yya"
## [1] "uc002otv" "uc001qba" "uc004cxi" "uc004cmp" "uc001mvx" "uc001nup"
## [7] "uc003vfc" "uc003han" "uc002unj" "uc002ies"
## [1] "uc003iew" "uc003tbv" "uc002gvt" "uc003pko" "uc003tre" "uc002yki"
## [7] "uc001kgn" "uc003hzc" "uc001qyu" "uc004eof"
## [1] "uc002vqz" "uc003gbj" "uc003xcy" "uc002yki"
## [1] "uc002uxj" "uc002nym" "uc002ffk" "uc004csu" "uc011chq" "uc009zro" "uc003vqg"
## [8] "uc003btw"
## character(0)
## [1] "uc001hub" "uc010boe"
## Warning: Expected 2 pieces. Additional pieces discarded in 1 rows [4455].
## Warning: Expected 2 pieces. Additional pieces discarded in 1 rows [587].
## [1] "uc001csq" "uc001kzl" "uc003irb" "uc009zvk" "uc001kza" "uc002pcn"
## [7] "uc001vps" "uc002vqz" "uc002tob" "uc003akb" "uc001oct" "uc004evg"
## [13] "uc003oxd" "uc002cqk" "uc010boe" "uc003vcm" "uc003sjo" "uc001lrv"
## [19] "uc002njv" "uc003dab" "uc002zmj" "uc002pmw" "uc003ass" "uc003llm"
## [25] "uc002bdb" "uc003tyn" "uc002cok" "uc002nam" "uc001dpx" "uc002yki"
## [31] "uc001xjl" "uc003han" "uc004bsg" "uc011che" "uc002jva" "uc003aks"
## [37] "uc004cwk" "uc004dap" "uc002tjc" "uc002qis" "uc003kfs" "uc003ndx"
## [43] "uc003eas" "uc001apy"
## [1] "uc003gbi" "uc004asp" "uc002uhz" "uc011djb"
## [1] "uc003sju" "uc003tvh" "uc002uhz" "uc002vhq" "uc009xkg"
## [1] "uc002otw" "uc003qai" "uc001mvw" "uc001dpy" "uc002unn"
## [1] "uc003iex" "uc010kwf" "uc010kbr" "uc003trf" "uc002ykj" "uc001kgo" "uc001qyt"
## [8] "uc002dts"
## [1] "uc003gbi" "uc002ykj"
## [1] "uc010ftb" "uc002nyn" "uc003pdc" "uc003vqc"
## character(0)
## [1] "uc009xkg"
## [1] "uc001kyy" "uc003ake" "uc003tvh" "uc003ehk" "uc002bdc" "uc001dpy" "uc002ykj"
## [8] "uc003akr" "uc003eaq"